| ape | Analyses of Phylogenetics and Evolution |
| ars | Adaptive Rejection Sampling |
| bitops | Functions for Bitwise operations |
| BradleyTerry2 | Bradley-Terry models |
| brglm | Bias reduction in binomial-response GLMs. |
| BRugs | R interface to the OpenBUGS MCMC software |
| Cairo | R graphics device using cairo graphics library for creating
high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG,
PostScript) and display (X11 and Win32) output. |
| cairoDevice | Cairo-based cross-platform antialiased graphics device driver. |
| clv | Cluster Validation Techniques |
| coda | Output analysis and diagnostics for MCMC |
| corpcor | Efficient Estimation of Covariance and (Partial) Correlation |
| digest | Create cryptographic hash digests of R objects |
| e1071 | Misc Functions of the Department of Statistics (e1071), TU Wien |
| gee | Generalized Estimation Equation solver |
| geoR | Analysis of geostatistical data |
| geoRglm | geoRglm - a package for generalised linear spatial models |
| ggplot2 | An implementation of the Grammar of Graphics |
| glmmML | Generalized linear models with clustering |
| gplots | Various R programming tools for plotting data |
| itertools | Iterator Tools |
| kml | K-Means for Longitudinal Data (KmL) |
| lme4 | Linear mixed-effects models using S4 classes |
| longitudinalData | Longitudinal Data |
| maptools | Tools for reading and handling spatial objects |
| Matrix | Sparse and Dense Matrix Classes and Methods |
| MCMCglmm | MCMC Generalised Linear Mixed Models |
| osmar | Importing and working with OpenStreetMap-Data |
| permute | Functions for generating restricted permutations of data |
| plyr | Tools for splitting, applying and combining data |
| png | Read and write PNG images |
| profileModel | Tools for profiling inference functions for various model
classes |
| proto | Prototype object-based programming |
| RandomFields | Simulation and Analysis of Random Fields |
| RCurl | General network (HTTP/FTP/...) client interface for R |
| repeated | Non-normal Repeated Measurements Models |
| reshape | Flexibly reshape data. |
| RgoogleMaps | Overlays on Google map tiles in R |
| rmutil | Utilities for Nonlinear Regression and Repeated Measurements Models |
| RSQLite | SQLite interface for R |
| scapeMCMC | MCMC Diagnostic Plots |
| spc | Statistical Process Control |
| splancs | Spatial and Space-Time Point Pattern Analysis |
| surveillance | Modeling and monitoring discrete response time series |
| tensorA | Advanced tensors arithmetic with named indices |
| vegan | Community Ecology Package |
|
| abind | Combine multi-dimensional arrays |
| Amelia | Amelia II: A Program for Missing Data |
| AMORE | A MORE flexible neural network package |
|
| bayesm | Bayesian Inference for Marketing/Micro-econometrics |
| bitops | Functions for Bitwise operations |
|
| cairoDevice | Cairo-based cross-platform antialiased graphics device driver. |
| car | Companion to Applied Regression |
| chron | Chronological objects which can handle dates and times |
| coda | Output analysis and diagnostics for MCMC |
| colorspace | Color Space Manipulation |
| combinat | combinatorics utilities |
|
| date | Functions for handling dates |
| DBI | R Database Interface |
| Design | Design Package |
| DiagnosisMed | Diagnostic test accuracy evaluation for medical professionals. |
| doMC | Foreach parallel adaptor for the multicore package |
| doSNOW | Foreach parallel adaptor for the snow package |
|
| eco | R Package for Ecological Inference in 2x2 Tables |
| effects | Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, Proportional-Odds Logit Models and
mixed-effects models |
| Epi | A package for statistical analysis in epidemiology. |
| epibasix | Elementary Epidemiological Functions for a Graduate
Epidemiology\Biostatistics Course |
| epicalc | Epidemiological calculator |
| epiR | Functions for analysing epidemiological data |
| epitools | Epidemiology Tools |
|
| fArma | ARMA Time Series Modelling |
| fAsianOptions | EBM and Asian Option Valuation |
| fAssets | Rmetrics - Assets Selection and Modelling |
| fBasics | Rmetrics - Markets and Basic Statistics |
| fBonds | Bonds and Interest Rate Models |
| fCopulae | Rmetrics - Dependence Structures with Copulas |
| fEcofin | Economic and Financial Data Sets |
| fExoticOptions | Exotic Option Valuation |
| fExtremes | Rmetrics - Extreme Financial Market Data |
| fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |
| fImport | Rmetrics - Economic and Financial Data Import |
| fMultivar | Multivariate Market Analysis |
| fNonlinear | Nonlinear and Chaotic Time Series Modelling |
| fOptions | Basics of Option Valuation |
| foreach | Foreach looping construct for R |
| fPortfolio | Rmetrics - Portfolio Selection and Optimization - ebook
available at www.rmetrics.org |
| fRegression | Regression Based Decision and Prediction |
| fTrading | Technical Trading Analysis |
| fUnitRoots | Trends and Unit Roots |
| fUtilities | Function Utilities |
|
| g.data | Delayed-Data Packages |
| gam | Generalized Additive Models |
| gdata | Various R programming tools for data manipulation |
| genetics | Population Genetics |
| getopt | C-like getopt behavior. |
| gmaps | Wrapper and auxilliary functions for maps package to work with
grid graphics system. |
| gmodels | Various R programming tools for model fitting |
| gtools | Various R programming tools |
|
| haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates
when Linkage Phase is Ambiguous |
| hdf5 | HDF5 |
| Hmisc | Harrell Miscellaneous |
|
| int64 | 64 bit integer types |
| iterators | Iterator construct for R |
| its | Irregular Time Series |
|
| jit | Just-in-time compiler for the R language |
|
| lme4 | Linear mixed-effects models using S4 classes |
| lmtest | Testing Linear Regression Models |
| lpSolve | Interface to Lp_solve v. 5.5 to solve linear/integer programs |
|
| mapdata | Extra Map Databases |
| mapproj | Map Projections |
| maps | Draw Geographical Maps |
| maptools | Tools for reading and handling spatial objects |
| MatchIt | MatchIt |
| misc3d | Miscellaneous 3D Plots |
| mnormt | The multivariate normal and t distributions |
| MNP | R Package for Fitting the Multinomial Probit Model |
| msm | Multi-state Markov and hidden Markov models in continuous time |
| multcomp | Simultaneous Inference in General Parametric Models |
| multicore | Parallel processing of R code on machines with multiple cores or
CPUs |
| mvtnorm | Multivariate Normal and t Distributions |
|
| nws | R functions for NetWorkSpaces and Sleigh |
|
| plotrix | Various plotting functions |
| polspline | Polynomial spline routines |
| pscl | Political Science Computational Laboratory, Stanford University |
| psy | Various procedures used in psychometry |
|
| qtl | Tools for analyzing QTL experiments |
| quadprog | Functions to solve Quadratic Programming Problems. |
| qvalue | Q-value estimation for false discovery rate control |
|
| R2jags | A Package for Running jags from R |
| R2WinBUGS | Running WinBUGS and OpenBUGS from R / S-PLUS |
| randomForest | Breiman and Cutler's random forests for classification and
regression |
| Rcmdr | R Commander |
| RColorBrewer | ColorBrewer palettes |
| Rcpp | Seamless R and C++ Integration |
| relimp | Relative Contribution of Effects in a Regression Model |
| rggobi | Interface between R and GGobi |
| rgl | 3D visualization device system (OpenGL) |
| Rglpk | R/GNU Linear Programming Kit Interface |
| RGtk2 | R bindings for Gtk 2.8.0 and above |
| rjags | Bayesian graphical models using MCMC |
| RMySQL | R interface to the MySQL database |
| robustbase | Basic Robust Statistics |
| RODBC | ODBC Database Access |
| Rserve | Binary R server |
| Rsymphony | Symphony in R |
| RUnit | R Unit test framework |
|
| sandwich | Robust Covariance Matrix Estimators |
| slam | Sparse Lightweight Arrays and Matrices |
| sm | Smoothing methods for nonparametric regression and density
estimation |
| sn | The skew-normal and skew-t distributions |
| snow | Simple Network of Workstations |
| sp | classes and methods for spatial data |
| spc | Statistical Process Control |
| strucchange | Testing, Monitoring, and Dating Structural Changes |
|
| TeachingDemos | Demonstrations for teaching and learning |
| timeDate | Rmetrics - Chronological and Calendarical Objects |
| timeSeries | Rmetrics - Financial Time Series Objects |
| tseries | Time series analysis and computational finance |
|
| urca | Unit root and cointegration tests for time series data |
|
| vcd | Visualizing Categorical Data |
|
| XML | Tools for parsing and generating XML within R and S-Plus. |
| xtable | Export tables to LaTeX or HTML |
|
| zoo | S3 Infrastructure for Regular and Irregular Time Series (Z's
ordered observations) |
| base | The R Base Package |
| boot | Bootstrap Functions (originally by Angelo Canty for S) |
| class | Functions for Classification |
| cluster | Cluster Analysis Extended Rousseeuw et al. |
| codetools | Code Analysis Tools for R |
| compiler | The R Compiler Package |
| datasets | The R Datasets Package |
| foreign | Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase,
... |
| graphics | The R Graphics Package |
| grDevices | The R Graphics Devices and Support for Colours and Fonts |
| grid | The Grid Graphics Package |
| KernSmooth | Functions for kernel smoothing for Wand & Jones (1995) |
| lattice | Lattice Graphics |
| MASS | Support Functions and Datasets for Venables and Ripley's MASS |
| Matrix | Sparse and Dense Matrix Classes and Methods |
| methods | Formal Methods and Classes |
| mgcv | GAMs with GCV/AIC/REML smoothness estimation and GAMMs by PQL |
| nlme | Linear and Nonlinear Mixed Effects Models |
| nnet | Feed-forward Neural Networks and Multinomial Log-Linear Models |
| parallel | Support for Parallel computation in R |
| rpart | Recursive Partitioning |
| spatial | Functions for Kriging and Point Pattern Analysis |
| splines | Regression Spline Functions and Classes |
| stats | The R Stats Package |
| stats4 | Statistical Functions using S4 Classes |
| survival | Survival analysis, including penalised likelihood. |
| tcltk | Tcl/Tk Interface |
| tools | Tools for Package Development |
| utils | The R Utils Package |
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